Machine learning for chemotherapy decision-making in breast cancer using large language model

Citation

Nabi, Md Serajun and Yuden, Dema and Choden, Thinley Yeshey and Asiful Islam Saky, S. M. and Bannah, Hasanul and Hossen, Md Sabbir and Fauzi, Mohammad Faizal Ahmad and Abdul Karim, Hezerul (2026) Machine learning for chemotherapy decision-making in breast cancer using large language model. Frontiers in Digital Health, 8. ISSN 2673-253X

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Abstract

Introduction: Breast cancer chemotherapy decision-making remains challenging due to biological heterogeneity and variability in clinical practice. This study proposes a hybrid framework integrating machine learning (ML), causal reasoning, and large language models (LLMs) to improve treatment recommendations. Methods: Using the METABRIC dataset, eleven pre-treatment clinicopathologic variables were selected. A Random Forest classifier was developed and compared with baseline ML models. Individualized treatment benefit was estimated through inverse probability-weighted causal survival analysis, while GPT-4 was employed using few-shot prompting to generate clinical rationales. Results: The Random Forest achieved an AUC of 0.91, outperforming benchmark models. Causal analysis identified heterogeneous treatment benefits and patient groups where chemotherapy could potentially be deprioritized. GPT-4 showed moderate agreement with the Random Forest (Cohen’s κ = 0.13) while consistently highlighting clinically relevant factors. Uplift-based ML policies outperformed treat-all and treat-none strategies, and GPT-4 improved interpretability through rationale-driven explanations. Discussion: By combining predictive ML, causal survival modeling, and LLMbased rationale generation, the proposed framework provides a promising approach for personalized and transparent chemotherapy decision support in oncology.

Item Type: Article
Uncontrolled Keywords: Digital health, breast cancer
Subjects: R Medicine > RC Internal medicine > RC0254 Neoplasms. Tumors. Oncology (including Cancer)
Divisions: Faculty of Artificial Intelligence & Engineering (FAIE)
Depositing User: Ms Rosnani Abd Wahab
Date Deposited: 04 Aug 2026 02:24
Last Modified: 04 Aug 2026 02:24
URII: http://shdl.mmu.edu.my/id/eprint/16459

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