db4DNASeq: An Object-oriented DNA Database Model associated with Sequence Search Method

Keng Hoong, Ng and Kyuk Wei, Shoo and Wei Liam, Diong and Somnuk, Phon-Amnuaisuk and Chin Kuan, Ho (2008) db4DNASeq: An Object-oriented DNA Database Model associated with Sequence Search Method. In: Knowledge Management International Conference, 10-12 JUN 2008, Univ Utara, Coll Arts & Sci, Langkawi, MALAYSIA .

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Abstract

DNA database consists of many nucleotide sequences, it is not only supporting typical database queries, but it also needs to facilitate sequence search and alignment. In this paper, we present an object-oriented nucleotide database which is designed not only for the convenience of executing normal database operations such as insertion, modification or data querying in a fast manner, but it also supports a fast search method on database sequences with reasonable tradeoff between time and memory usage.

Item Type: Conference or Workshop Item (Paper)
Subjects: T Technology > T Technology (General)
Q Science > QA Mathematics > QA75.5-76.95 Electronic computers. Computer science
Divisions: Faculty of Engineering and Technology (FET)
Depositing User: Ms Suzilawati Abu Samah
Date Deposited: 29 Sep 2011 07:12
Last Modified: 29 Sep 2011 07:12
URI: http://shdl.mmu.edu.my/id/eprint/2943

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